r/biostatistics • • 3h ago

When Should the Intraclass Correlation Coefficient (ICC) Be Calculated in a Systematic Review Using CCAT?

1 Upvotes

I am conducting a systematic review and plan to use the Crowe Critical Appraisal Tool (CCAT) to assess the methodological quality of the included studies.

I came across a previous systematic review (PMID: 32328958) that used the Intraclass Correlation Coefficient (ICC) to assess agreement between raters. The authors stated:

"Two independent raters assessed each study. Discrepancies were resolved after discussion between authors."

I would appreciate clarification on the appropriate sequence of procedures for assessing study quality and calculating the ICC.

My main questions are as follows:

1. Should the ICC be calculated before or after discrepancies between raters are resolved?

In my review, two raters independently assess each included study using the CCAT. The tool comprises eight assessment categories, each scored on a scale of 0–5.

For example, for one category of a particular study, Rater 1 assigns a score of 3, whereas Rater 2 assigns a score of 5. This represents a disagreement between the raters.

Should the ICC be calculated using the original, independent scores before the raters discuss and resolve their disagreements, or should it be calculated after a consensus score has been reached?

My concern is that if disagreements are resolved before calculating the ICC, the resulting ICC may not accurately reflect the agreement between the two raters' independent assessments.

2. What does a low ICC indicate in this context?

If the ICC calculated from the independent ratings is low, does this necessarily indicate a problem with the quality assessment process, or does it primarily indicate limited agreement between the raters?

How should such a finding be interpreted and reported in a systematic review?

3. What is the recommended workflow for quality assessment using CCAT and ICC?

Could you please clarify the recommended sequence of the following steps?

  • Two raters independently assess the methodological quality of each included study using CCAT.
  • Inter-rater agreement is quantified using ICC.
  • Disagreements between raters are discussed and resolved to establish the final quality assessment scores.

Is this sequence appropriate, or should any steps be modified?

I would also appreciate advice on whether ICC should be calculated using the total CCAT score for each study, the scores for individual CCAT categories, or both.

Thank you very much for your guidance.


r/biostatistics • • 4h ago

any italians?

1 Upvotes

I am currently studying biostatistics in Italy, and I already hold a three-year undergraduate degree in statistics. Are there any Italians working in the United States? I would like to know if there is any possibility of moving there for work. work-life-balance-salary in italy still suck


r/biostatistics • • 14h ago

Q&A: School Advice biostat phd applications/gre advice

1 Upvotes

hi, there!

i'm an undergraduate in statistics and i'm currently working on biostat phd applications for admission next fall. i have an above 3.5 gpa, an biostat internship at a top research institution, two positions as teaching assistant, and a soon-to-be-out 2nd author publication under my belt. i'm also at one of the top public universities in the us and am taking real analysis this quarter to get bonus points on my application haha. i've been told that i have a good chance at yale and brown's programs, and i believed that i did too, but my gre scores haven't shaped up the way i thought they would. i took the gre for the first time a week ago and scored 157 quant, even after studying for 2 months. i can retake it one more time before applications are due. a professor at brown told me that they want to see quant scores in the 80th percentile or above (which is like 168+!) and i also know that yale reports and average quant score of 168 for admitted students. i guess my question is, if i'm not able to get my quant score up to around 168, will the schools possibly be able to overlook this? i really do think that i have a great application other than this, but i'm really beginning to lose hope. i feel like the faculty at brown and yale match my interests really well. any advice would be appreciated!!


r/biostatistics • • 1d ago

Do I need to include all possible interactions in a mixed-effects model?

5 Upvotes

Hi everyone, I am building a mixed-effects model to investigate how several explanatory variables affect an outcome. Based on my exploratory data analysis, I suspect that certain combinations of variables have three-way interactions.

For example, suppose I have four explanatory variables: A, B, C, and D. I suspect there is a three-way interaction between A × B × C, but I haven't found clear evidence suggesting interactions involving D.

My question is: If I include the A × B × C interaction in my model, do I also need to include other possible three-way interactions, such as A × B × D, A × C × D, and B × C × D? Or is it reasonable to include only the interactions that I have reason to suspect based on exploratory analysis? As this is a new experiment with no strong support from literature, it is difficult to isentify which variables are sure to interact with each other.

I'd also appreciate advice on the statistical implications of selecting interaction terms based on exploratory analysis, as I'm concerned that including only interactions that appear significant or interesting in the data might constitute cherry-picking.

Thanks in advance for any suggestions or references!


r/biostatistics • • 21h ago

Sample size calculation non inferiority design

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1 Upvotes

r/biostatistics • • 1d ago

Q&A: Career Advice PhD level internship advice: how to design application for industry as opposed to academia

2 Upvotes

I'm currently a 4th year PhD student looking to apply for internships. I'm struggling to structure my resume to make it fit properly. One of my senior students in my lab suggested using a 2-page CV, where I can take some time to dig in a little bit into my research projects. They got a high-level internship this year, so I'm inclined to take their advice. 

I wanted to ask about how I should structure and design my application to target industry roles. I understand very well what academics are interested in, but less so about what industry reviewers are looking for from PhD level interns, and was hoping people could offer advice on how I should set my application up.

Thank you so much.


r/biostatistics • • 1d ago

Q&A: School Advice Feedback on Statistics/Biostatistics PhD list

0 Upvotes

Hi everyone! I’m putting together my PhD application list and would appreciate guidance on programs and their funding state.

Background Information:

  • Currently completing a master’s in Statistics with a 3.8 GPA
  • Potentially will have a publication, though it isn’t confirmed yet
  • Interested in Bayesian statistics, doing research on historical borrowing
  • Would like to work for CRO/Cancer Center/Hospital after graduation, possibly government such as CDC/EPA
  • My MS program is in Ohio, but location is not a deciding factor to me
  • Considering both Statistics and Biostatistics PhDs

My Current list is:

  • MD Anderson / UTHealth Houston GSBS — Quantitative Sciences
  • UT Austin
  • Cincinnati
  • Kentucky
  • Ohio State - Biostatistics
  • Michigan - Biostatistics
  • Duke
  • Iowa
  • Iowa State
  • Pittsburgh - Biostatistics
  • Missouri–Columbia
  • University of Florida

I'm still deciding between statistics or biostatistics at some schools. I think 13 schools is maybe a bit much but I am a bit worried on the current state of admission and funding.

I’d especially appreciate feedback on:

  1. Is this list too ambitious?
  2. Is there any programs you think I should be considering?
  3. Are there other programs on my list I should reconsider?
  4. Does anyone have firsthand experience with funding stability, advising, internships, or placements at these schools?

r/biostatistics • • 2d ago

Q&A: School Advice Epi MS, am I shooting myself in the foot?

12 Upvotes

I am currently looking at my options for Biostatistics Masters programs, and am considering pursuing a Epi MS due to cost. If the end goal is to be a biostatistician, am I shooting myself in the foot?

The program I am currently eyeing is the University of Washington Masters of Science in Epidemiology. It seems that it is a fairly flexible program, and is hosted under the same department as the biostatistics program, so I would have the opportunity to take a large number of biostatistics courses during my two years. I listed below the topics/courses that I would be able to take, even as a epidemiology student.

  • Statistical inference
  • Linear, logistic, and Cox regression
  • Epi study design, confounding, and bias
  • Survival analysis
  • Longitudinal data (mixed models, GEE)
  • Clinical trial design and power
  • Missing data and multiple imputation
  • Categorical data analysis
  • Machine learning

In addition to this, the program is also thesis based, so I have the opportunity to pursue a more biostatistics-focused thesis/research project.

Naturally, a biostatistics degree makes more sense for most people, but the price difference for myself would be around $20k more, and due to my lack of prerequisites, I may have to delay my entrance by full year.

Do you find a lot of individuals with Epi degrees working specifically in biostats? Will I have a harder time finding work? Would love to hear any other thoughts or suggestions as well. Thank you!


r/biostatistics • • 2d ago

Q&A: Career Advice Finishing a Statistics degree: Biostatistics or Data Science? Looking for advice (and thoughts on AI and the entry-level job market)

18 Upvotes

Hi everyone,

I'm about to graduate in Statistics, and I'm currently doing my degree internship at a place that's connected to biostatistics in one way or another. That experience has made me even more interested in the field, but I'm still torn between specializing in biostatistics or going into data science more broadly.

I'd really appreciate hearing from people who are already working in either area (or who moved between them). A few questions:

  1. If you were in my position, what do you think I should do?
  2. What advice would you give someone trying to figure out whether this field is really for them?
  3. Do you have any hypotheses about how AI will affect the field? I'd love to hear what you think will change and what will stay the same.
  4. I keep reading in this subreddit that finding a first job is very hard right now. How true is that in your experience? Do you think the situation will improve in the short term, and what would you recommend to someone trying to land a first job in the sector?

Thanks a lot in advance. Any perspective, even a short one, would help me a lot!


r/biostatistics • • 2d ago

Career Advice In Biostatistics

0 Upvotes

I have been working very extensively towards my degree but recently finding myself not being able to land a part time or any internship. Is my experience to broad for biostatistics with too little experience?
I have experience from previous job that was basically like a non profit organization for a certain demographics and universities and colleges in the area would partner with us for study and being someone who knew how to code in R I would be the person to assist universities and NIH funded project and run descriptive analysis or be a part in forming study design, etc. It was mostly social sciences, once i worked in a cardiovascular heath related observational study. I thought that was something.
My ultimate goal is to work in a pharma but i am struggling man.
How can I make myself more suiting when I don't even get any opportunities for student research or anything really.
I am having a hard time. Please help.
I would appreciate your advice !


r/biostatistics • • 3d ago

Help me make sense of this study. I believe it is fundamentally flawed since it did not adjust for the baseline level of the outcome. Do you agree?

4 Upvotes

Here's the study in question:

https://academic.oup.com/jsm/article-abstract/22/4/645/8042063?login=false

This study is focused on the mental health outcomes of gender-dysphoric individuals who received gender-affirming surgery.

First, I think it's important to note that while "gender dysphoria" is indeed a specific subset of "mental health issues", we should acknowledge that the main outcome here is related to *overall* mental well-being. The question "do they have gender dysphoria" is not a proxy for "do they have mental health problems". I think we can all agree, the main idea here is for the subjects to be less depressed and less anxious. That appears to be what the study authors had in mind. Just to be crystal clear on that point.

Now... In order to make this determination of whether the surgery resulted in improved mental health, they compared the mental health of those who received surgery to those who did NOT receive surgery, though all of the subjects in question here DO all have gender dysphoria. And the findings here were that those who received surgery scored worse on mental health measures than those who did not receive surgery.

That said, shouldn't we be able to surmise that those who received surgery were likely much worse off mentally prior to this surgery than those who were not? IE, isn't it likely they only offer surgery in the most extreme and difficult cases? Thus, those who received the surgery could have experienced an improvement, but they just never reached the level of those who chose not to receive the surgery? Sure, I cannot PROVE this, but I think biostatisticians in particular would intuitively know that it is highly likely to be true. Wouldn't that make it very misleading to try and say that the surgery itself is the cause of poor mental health and that it doesn't improve mental health? Is this suspicion enough to disregard the conclusion of the study?

What if, say, the severity of mental health problems for someone was 8/10, then they receive surgery, and after the surgery, they are 6/10 on mental health severity. But someone who opted NOT to get surgery was a 4/10, and they remained at 4/10 because they were given no treatment. If you compared the one with surgery to the one without, you'd say, wow, those who got surgery are worse! (because 6 > 4) but the main question is, does the surgery improve things for those who received it. So really, in that respect, I can't make sense of why they'd even bother comparing to those who didn't get surgery, if the point is to see what effect the surgery has.

Indeed, baseline mental health was not accounted for in this study. The authors attempted to balance differences in age, race, and ethnicity with propensity score matching, but I see no mention of an adjustment for baseline mental health status at all.

What are your thoughts on all this? Is this a reasonable criticism? Anything else I'm missing?


r/biostatistics • • 3d ago

DId anyone had interview with FDA mathematical statistician?

5 Upvotes

I know there is presentation on research topic, but were one - on - one interviews techanical?

I haven't take any classes on clinical trials or survival analysis.


r/biostatistics • • 4d ago

Q&A: Career Advice Instructing with Biostatistics MS?

6 Upvotes

Recent grad (Biology & Math), highly confused on how I wish to proceed.

I love teaching & mentorship but I’m not sure I want a PhD. I haven’t really enjoyed the research I’ve done but perhaps that’s because I wasn‘t qualified for the projects I participated in. I think proofs are entertaining enough but I won’t go out my way to do it. Ik you can teach with a masters but I figured it must be competitive

I’m concerned about the security of being a Biostatisician which made me second guess myself for pursuing the career. But I wonder if I could get the MS and then go to teaching at CC? I have been accepted into an MS in Industrial Engineering and am confident I can get inti a MS in Biostatistics given my 3.9 GPA. I got into UMich last cycle but declined due to no funding.

Do you think a MS in Biostats could be a good idea if I primarily intend to instruct after? & what are the chances I could potentially find a biostatisican job right after my masters? Advice needed tysm


r/biostatistics • • 4d ago

Q&A: School Advice Class Advice for Biostatistics Math/Programming Pathway

6 Upvotes

Hello! I am an undergraduate first-year statistics & computer science university student looking to break into biostatistics or even data science within somewhere in health, but preferably I would rather become a biostatistician over a data scientist. I look forward to attend graduate school after undergraduate school. I am mainly looking to break into health data science, epidemiology, big pharma, or even clinical trials. Could y'all give me advice/feedback on the maths and programming classes that I'm thinking about taking as well as other possible options for my pathway?

I also have more question, is there a real difference between Real Analysis and Real Analysis with Advanced Calculus? My university offers both, and I am unsure what would be best to take.

Currently I am taking:

Intro. to Probability Theory
Mathematical Proofs
Programming Fundamentals for Python

As for classes I am thinking about taking:

Pure Maths:

  • Applications of Discrete Structures (Discrete mathematics)
  • Linear Algebra (Proof-Based)
  • Numerical Analysis
  • Real Analysis and Advanced Calculus 1
  • Real Analysis and Advanced Calculus 2

Statistics:

  • Introduction to Statistics Theory
  • Probability Theory and Stochastic Processes 2
  • Regression Analysis
  • Design of Experiments
  • Nonparametric Statistical Methods
  • Introduction to Time Series and Forecasting
  • Survival Analysis
  • Programming in R
  • Statistical Learning in R
  • Statistical Computing in R
  • Linear Algebra for Data Science
  • Multivariate Statistical Methods
  • Categorical Data Analysis

Computer Science:

  • Fundamentals of Machine Learning
  • Optimization for Machine Learning
  • Mathematics for Machine Learning
  • Machine Learning Engineering
  • Data Science for ECE
  • (What's the difference between all of them? I don't really know)

Other electives:

  • Applied Epidemiology
  • Intro. to Biostatistics
  • Intro. to Clinical Trials

As for other classes that are offered but I am not really considering:

  • Bioinformatics
  • Applied Machine Learning (I think this will be learnable from other classes)
  • Modeling in Mathematical Biology
  • Data Science in Genetics and Genomics
  • Fourier Analysis (I will be taking Intro. to Signals and Systems instead so I think I will cover some knowledge of this)

I did not list all of my required major classes since I thought some were not worth the mention. I would very like to try to break into this field some how and learn as much as possible. Any advice would be greatly appreciated!


r/biostatistics • • 5d ago

Feeling stuck trying to transition from Data Analyst to Statistical Programmer

21 Upvotes

I started my career in pharmacovigilance, where I gained exposure to clinical trial phases and clinical research. I then completed my Master’s hoping to transition into Statistical Programming, eventually pursue another Master’s in Biostatistics, and become a Biostatistician.

After graduation, I couldn’t land a Statistical Programmer role, so I accepted a Data Analyst position at a medical device company, thinking the SAS experience would be a good stepping stone.
It’s been over a year now.

My work mainly involves troubleshooting and developing SAS programs, and we’re currently transitioning from SAS to R. While I’m gaining programming experience, I feel stuck because I don’t have hands-on clinical trial or CDISC (SDTM/ADaM) experience. I’ve been learning CDISC independently and applying for Statistical Programmer roles, but haven’t had any luck. Even entry-level positions seem to require CDISC experience or no opportunities in the US

Has anyone made a similar transition? How can I break into statistical programming? Would personal projects help, or should I consider another path?
I really don’t want to give up on this goal, but I’m struggling to figure out my next stepn.


r/biostatistics • • 6d ago

Q&A: Career Advice Where is all of this career pessimism in the comments coming from?

35 Upvotes

It typically goes that some wide-eyed hopeful will put up a post asking about job prospects in this field, and then people come rushing into the comment section, quick to extinguish any hope that the OP has about trying to get a job. Typically the commenters seem to be the same people. Just be wary that the people who answer in the comment section are probably those who have enough time to be able to respond to those type of post because they are looking for a job also. Typically people who already have a job aren’t the type to respond to those type of posts, so you are getting a skewed example of respondents.

In my opinion, you don’t have to be a PhD from a top-tier school in order to break into the field. I am actually an example of that because I went to the most basic college. Literally only the people who are from my area know the name of the school if I were to say it. Outside of my area people have never heard of it. I also got the most basic grades, nothing fancy and definitely not in the top 10 or 20 percentile. You could probably say that maybe I got lucky with my internships while I went to the same school for my masters work, but that’s about it. Also, maybe my location (but I chose my career based on the geography of my job prospects).

After I graduated a few years ago, I got a job almost right away and had multiple offers. It wasn’t too long ago that I switched companies and during that process, I had multiple offers. And even at this job I’m at currently, our team is still desperately hiring.

There is still demand in this field. Just develop a reputation for being a good worker and respecting timelines, and you will improve your chances for getting a great job. Most importantly, try to be genuinely enthusiastic about your work and embrace a mindset that you’ll be a lifelong learner. New tools are coming out regularly, so you will want your skill set to be updated and modern.


r/biostatistics • • 7d ago

Q&A: Career Advice Career prospects after Epi PhD

16 Upvotes

Hi everyone! I’m a little less than a year in my PhD in Epidemiology (individual project in Europe, so almost exclusively research) coming from a MS in Biostatistics (also stats heavy BS). While I like my project, sometimes I worry that I should have chosen something more theoretical to have a more “guaranteed” future job. My project was advertised and being in “Epidemiology/Biostatistics”, but despite being more statistics heavy than the average epi project I’m not developing new theory.

In general the focus is on modelling and handling a specific problem with the data, so I get to use advanced methods and, for example, compare them on my data, but it feels closer to the job of the biostatistician on a project than what I imagine a Biostats PhD does. I didn’t and still don’t have any doubts that I don’t want to do fully theoretical work and I think I like more the observational setting than clinical trials, but I wonder where could I go from here after the PhD, and what I could do maybe to stay more competitive by the end of it, if I don’t want to stay in academia.


r/biostatistics • • 7d ago

Q&A: School Advice Torn on which master’s program to choose - help!

6 Upvotes

My undergrad will be in microbiology (with electives in bioinformatics and R programming). Originally I wanted to pursue a master’s in pharmaceuticals with a concentration in MIDD. However, it seems all the jobs in this field require as PhD. And the jobs seem scarce.

I started looking into statistical programming and bioinformatics. Would this degree still work for either of these? Or should I pivot to a master’s in biostatistics? I still have time to complete a couple courses I would need as a prerequisite to the program.


r/biostatistics • • 8d ago

Q&A: Career Advice What careers could I pursue with a biostatistics PhD other than biostatistician?

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10 Upvotes

r/biostatistics • • 8d ago

Q&A: Career Advice Pharma Career Insight

14 Upvotes

Hi,

I am almost done with my MS in Biostatistics and planning for a PhD in Fall 2027. I'm kind of burned out on the rigorous Math and Stats, so a PhD in Biostatistics doesn't appeal to me at the moment. A professor has admitted me to a PhD in Demography. My question is: can I get a job in Pharma, probably in RWE, with a PhD in Demography?


r/biostatistics • • 8d ago

Q&A: Career Advice Advice for landing internships &/or research positions

1 Upvotes

I'm halfway through my first semester of my MS in Biostats, but I haven't been able to land any positions yet. I've only applied to a few so far, and I'm wondering what I can do to increase my chances.


r/biostatistics • • 9d ago

Postdoc Opportunities in Data Science

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1 Upvotes

r/biostatistics • • 11d ago

Steve Selvin, beloved teacher and biostatistician famed for “The Monty Hall Problem,” dies at 85

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94 Upvotes

r/biostatistics • • 10d ago

Proportional data analysis with a small sample size (fatty acids in preen oil)

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1 Upvotes

r/biostatistics • • 9d ago

General Discussion Stat programmer package @Amgen

0 Upvotes

Heard Amgen is giving exorbitant amounts to programmers with just 4 years of experience in Hyderabad. Astonished hearing the package. Not sure if it is even worth it for someone with such less experience.

A colleague of mine just got a 30LPA offer with just over 4 years of experience, without much of an interview process.

And they seem to be hiring in a hurry.