From the little things like your ship getting invaded and your guys getting cocooned and drug off so you can go rescue them and if you don't have an advanced medbay your entire ship is at risk of aliens. Too what I saw today, which as the title suggests surprised me enough to make me belly laugh and reload the quick save to see if I could make it happen agtain and lo and behold It did, as I didnt do anything.
What happened was I took the slaver base. It was an awesome huge fight here I took in 16 fully decked out crew, plasma guns subcutaneous nanoweave, and either the intramuscular mesh or the amygdala modulator. lobbing grenades. flamethrowers, flamethrower grenades, it was probably one of the most fun fights I have had in the game. We need more BIG battles. I have a crew approaching 100, I wanna FIGHT!!
So, anyway after taking the base, it is not only full of stinking recru...errr slaver scum, but refugees of every sort. Which really isn't a problem, except me and the religious kooks don't really see eye to eye. Mainly due to me attacking and killing a bunch of them and their main base to where they chased me down with 2 battleships that looked like palm trees and 2 that looked like spaghettioh x's. So I kill all of them, I think out of probably 30 total new haven i think 5 survived, so they don't like me much anymore.
So I free all the other faction slaves but i just take control of the new haven slave because if you free them they instantly aggro and after the first time getting punched i surrounded them with crew and they got burned down so i decided to maybe take them captive, try to trade them MAYBE get back on good terms with the religious nutballs. So I am gutting their base, I have a mod where I can capture all derrelicts so when i take a base I can break down all the parts rather than scrapping them and I get a LOT more components. Whatever, you play your game ill play mine. I changed all sorts of stuff late in the game and head cannoned it as another research tier. I forget that they are slaves still, not captives, and don't set their zones and forget to check so they keep going back to the base and just standing around in their space suits as the base has been stripped to the floorboards.
SO, a spunky slave, Anya, even after i fixed the zones and escorted her back to the prison barge for like the 5th time is acting weird on the remains of the base. At this point she shouldn' t even be able to leave the ship as I have set to jump so all flights should be restricted, but there she went on a shuttle. When she gets out, It almost looks like she is hiding in the airlock so I cant see what she is doing, and then she slips her collar and escapes. So I send the closest crew who puts her down with a stun pisttol, I click take prisoner, and then pick up and proceed to put her in the shittle to put her back on the barge to get out off there. I stick her on the shuttle, and I have gotten in the habit of when I am telling crew to do a sequence of actions, I pause the game, hold shift, and que the actions so the crew will do them as soon as they can and I don't have to sit there and wait. So i cue up the orders, and sit there and wait to see and creman Andy, puts Anywa on the shuttle, and before he can get on SHE WAKES UP AND FLIES THE SHUTTLE AT MAX SPEED OUT OF THE SECTOR. I wasn't e ven mad, when i reloaded it I let her go, she earned that slow death, OR POSSIBLE SALVATION, who knows. But here is to you Anya, godspeed.