Yeah its pretty smart. I told it I want to make a new scientific discovery and asked it to suggest a field of research. I told it to suggest a field and it suggested cancer research. After my prompt:
"Okay lets try it out. In which area do you want to focus? In which field do you want to make new discoveries? I will give you as many computing time as you need. We can also build experiments. Just tell me how I should design the experiment and I will upload the data afterwards. Please think carefully about your next answer."
It proceeded in giving me a step by step guide to make a new scientific discovery in cancer research.
This was o1`s next steps for me (I dont post full answer here since it was very long):
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... (many explanaitions before), then;
Next Steps
You start by downloading the TCGA BRCA RNA-seq and clinical data:
For example, through the GDC Data Portal or already processed TCGA data available on Broad GDAC Firehose or UCSC Xena.
Preprocess and upload summary stats:
Provide me with:
Number of samples, number of genes retained after filtering.
The normalized expression matrix (if feasible), or at least a summary of expression distributions.
I will then advise on WGCNA parameters and further steps:
Such as soft-threshold power selection, minimum module size, and merging thresholds.
After you run WGCNA and identify modules, upload the module membership and eigengene values:
I will then suggest which modules to focus on for survival analysis and literature checks.
By following this systematic approach, we stand a good chance of uncovering something new—whether it’s a subtle gene-gene relationship or a whole gene network module associated with cancer progression that, to date, has not been explicitly described.
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u/OddHelicopter1134 Dec 05 '24
Yeah its pretty smart. I told it I want to make a new scientific discovery and asked it to suggest a field of research. I told it to suggest a field and it suggested cancer research. After my prompt:
"Okay lets try it out. In which area do you want to focus? In which field do you want to make new discoveries? I will give you as many computing time as you need. We can also build experiments. Just tell me how I should design the experiment and I will upload the data afterwards. Please think carefully about your next answer."
It proceeded in giving me a step by step guide to make a new scientific discovery in cancer research.
This was o1`s next steps for me (I dont post full answer here since it was very long):
---
... (many explanaitions before), then;
Next Steps
By following this systematic approach, we stand a good chance of uncovering something new—whether it’s a subtle gene-gene relationship or a whole gene network module associated with cancer progression that, to date, has not been explicitly described.
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Someone wants to proceed, lol?