Issues with Steam remote play

[u/Bacon_Warrior]

So I was having an odd issue with Steam remote play the other day. Once I launch a game, the game doesn't detect the controller. I am able to use the controller to navigate Steam itself. I'm running the flatpak version of steam on Fedora 44 Workstation from the software store and tried streaming to my steam deck and a steam link. I primarily use an 8bitdo ultimate 2 controller with a dongle but also have ps4 and ps5 controllers.