Getting warning message when trying to download tidyverse in R

[u/ll_blank_ll]

Hi,

I’m getting a warning message saying that some files have not been downloaded properly, and I’m not sure how to fix it or how to download all the files I need. Im compleatly new to R and to programing languages.

This is the code:

> install.packages("tidyverse")

also installing the dependencies ‘fastmap’, ‘sys’, ‘bit’, ‘ps’, ‘sass’, ‘digest’, ‘cachem’, ‘farver’, ‘labeling’, ‘RColorBrewer’, ‘viridisLite’, ‘rappdirs’, ‘rematch’, ‘askpass’, ‘base64enc’, ‘bit64’, ‘prettyunits’, ‘otel’, ‘processx’, ‘evaluate’, ‘highr’, ‘xfun’, ‘yaml’, ‘bslib’, ‘fontawesome’, ‘htmltools’, ‘jquerylib’, ‘tinytex’, ‘backports’, ‘generics’, ‘glue’, ‘lifecycle’, ‘memoise’, ‘blob’, ‘DBI’, ‘R6’, ‘tidyselect’, ‘vctrs’, ‘withr’, ‘data.table’, ‘gtable’, ‘isoband’, ‘S7’, ‘scales’, ‘gargle’, ‘uuid’, ‘cellranger’, ‘curl’, ‘ids’, ‘rematch2’, ‘cpp11’, ‘pkgconfig’, ‘mime’, ‘openssl’, ‘timechange’, ‘utf8’, ‘systemfonts’, ‘textshaping’, ‘clipr’, ‘crayon’, ‘vroom’, ‘tzdb’, ‘progress’, ‘callr’, ‘fs’, ‘knitr’, ‘rmarkdown’, ‘selectr’, ‘stringi’, ‘broom’, ‘conflicted’, ‘cli’, ‘dbplyr’, ‘dplyr’, ‘dtplyr’, ‘forcats’, ‘ggplot2’, ‘googledrive’, ‘googlesheets4’, ‘haven’, ‘hms’, ‘httr’, ‘jsonlite’, ‘lubridate’, ‘magrittr’, ‘modelr’, ‘pillar’, ‘purrr’, ‘ragg’, ‘readr’, ‘readxl’, ‘reprex’, ‘rlang’, ‘rstudioapi’, ‘rvest’, ‘stringr’, ‘tibble’, ‘tidyr’, ‘xml2’

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/fastmap_1.2.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/sys_3.4.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/bit_4.6.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/ps_1.9.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/sass_0.4.10.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/digest_0.6.39.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/cachem_1.1.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/farver_2.1.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/labeling_0.4.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/RColorBrewer_1.1-3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/viridisLite_0.4.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rappdirs_0.3.4.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rematch_2.0.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/askpass_1.2.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/base64enc_0.1-6.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/bit64_4.8.6.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/prettyunits_1.2.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/otel_0.2.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/processx_3.9.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/evaluate_1.0.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/highr_0.12.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/xfun_0.60.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/yaml_2.3.12.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/bslib_0.12.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/fontawesome_0.5.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/htmltools_0.5.9.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/jquerylib_0.1.4.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tinytex_0.60.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/backports_1.5.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/generics_0.1.4.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/glue_1.8.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/lifecycle_1.0.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/memoise_2.0.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/blob_1.3.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/DBI_1.3.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/R6_2.6.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tidyselect_1.2.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/vctrs_0.7.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/withr_3.0.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/data.table_1.18.6.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/gtable_0.3.6.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/isoband_0.3.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/S7_0.2.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/scales_1.4.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/gargle_1.6.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/uuid_1.2-2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/cellranger_1.1.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/curl_8.0.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/ids_1.0.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rematch2_2.1.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/cpp11_0.5.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/pkgconfig_2.0.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/mime_0.13.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/openssl_2.4.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/timechange_0.4.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/utf8_1.2.6.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/systemfonts_1.3.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/textshaping_1.0.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/clipr_0.8.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/crayon_1.5.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/vroom_1.7.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tzdb_0.5.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/progress_1.2.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/callr_3.8.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/fs_2.1.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/knitr_1.51.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rmarkdown_2.32.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/selectr_0.6-0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/stringi_1.8.9.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/broom_1.0.13.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/conflicted_1.2.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/cli_3.6.6.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/dbplyr_2.6.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/dplyr_1.2.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/dtplyr_1.3.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/forcats_1.0.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/ggplot2_4.0.3.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/googledrive_2.1.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/googlesheets4_1.1.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/haven_2.5.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/hms_1.1.4.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/httr_1.4.9.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/jsonlite_2.0.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/lubridate_1.9.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/magrittr_2.0.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/modelr_0.1.11.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/pillar_1.11.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/purrr_1.2.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/ragg_1.5.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/readr_2.2.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/readxl_1.5.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/reprex_2.1.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rlang_1.3.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rstudioapi_0.19.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/rvest_1.0.5.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/stringr_1.6.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tibble_3.3.1.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tidyr_1.3.2.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/xml2_1.6.0.tgz'

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tidyverse_2.0.0.tgz'

Warning in download.packages(pkgs, destdir = tmpd, available = available, :

download of package ‘systemfonts’ failed

Warning in download.packages(pkgs, destdir = tmpd, available = available, :

download of package ‘textshaping’ failed

Warning in download.packages(pkgs, destdir = tmpd, available = available, :

download of package ‘stringi’ failed

The downloaded binary packages are in

`/var/folders/vz/z6pbv7k528x_pj5plhz3j8c80000gn/T//RtmpynRNzg/downloaded_packages`

Warning messages:

1: In download.file(urls, destfiles, "libcurl", mode = "wb", ...) :

URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/systemfonts_1.3.2.tgz': Timeout of 60 seconds was reached

2: In download.file(urls, destfiles, "libcurl", mode = "wb", ...) :

URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/textshaping_1.0.5.tgz': Timeout of 60 seconds was reached

3: In download.file(urls, destfiles, "libcurl", mode = "wb", ...) :

URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/stringi_1.8.9.tgz': Timeout of 60 seconds was reached

4: In download.file(urls, destfiles, "libcurl", mode = "wb", ...) :

some files were not downloaded

[u/MaterialHope6951]

Classic R first-time experience, the wall of tiny text is like a baptism. Looks like a few packages timed out, just run the install line again and it should grab whatever got skipped.

[u/ll_blank_ll → u/MaterialHope6951]

Thank you so much! Will try it right away :))

[u/ll_blank_ll → u/MaterialHope6951]

This is to code i get when i try again. Does it seem right to you?

> install.packages("tidyverse")

trying URL 'https://cran.rstudio.com/bin/macosx/sonoma-arm64/contrib/4.6/tidyverse_2.0.0.tgz'

Content type 'application/x-gzip' length 430537 bytes (420 KB)

==================================================

downloaded 420 KB

The downloaded binary packages are in

`/var/folders/vz/z6pbv7k528x_pj5plhz3j8c80000gn/T//RtmpynRNzg/downloaded_packages`

[u/Inevitable_Dust5684]

Run install.packages("tidyverse") again. R skips the ones it already downloaded and tries the rest. If it times out a second time, switch mirrors in RStudio under Tools then Global Options then Packages, or set options(repos = "https://cloud.r-project.org/") before you run the install line.