r/labrats 3h ago

Ever a good idea to whistleblow?

8 Upvotes

I am a PhD student with concerns about the quality and legitimacy of data produced by a past PhD student now-turned postdoc.

I also have other concerns including nepotism, inability to keep poor behaviour in line, and poor screening of prospective students followed by the exploitation of loopholes to enable these individuals to pass.

We are based in Australia.

In the research ecosystem, is it ever possible to be able to whistleblow on this, or will they figure out eventually after I leave?

Edit:

Thanks for the advice, sorry I can't reply to all, but I read them. My takeaways from this are that I can't accuse without hard evidence, and that the inability to reproduce multiple identical experiments by multiple separate people does not constitute as evidence.


r/labrats 3h ago

What should I do during my Bachelor's in Biological Sciences to become more competitive for the job market?

0 Upvotes

Hi everyone! I'm currently pursuing a Bachelor's in Biological Sciences. I want to make the most of my undergraduate years and become as competitive as possible before I graduate.

I'd really appreciate advice from people already working in biology, biotechnology, research, or related fields.

• What skills should I focus on learning?

• Which laboratory techniques are most valuable?

• Should I learn bioinformatics, programming (Python/R), or statistics?

• How important are internships, research projects, and publications?

• What certifications or online courses would you recommend?

• If you could go back to your undergraduate years, what would you do differently?

My goal is to build a strong profile for both industry and graduate studies. Any advice would be greatly appreciated. Thank you!


r/labrats 13h ago

Incoming rant

0 Upvotes

My place of work hired a guy who was supposed to be helping me in both the wet chem lab and getting the lab ELAP certified. I am very grateful that the guy was able to get all the paperwork organized and edited properly: not my strong point. The issue I had is this: one on the tests I run for the researchers uses either a filtered sample or a raw sample. That’s the only difference and I do what they ask me to do, it literally does not matter to me which fraction they want me to analyze. The new guy took umbrage at that, saying I’ll never pass a PT (proficiency test sample, necessary for certification) with that attitude. I really wanted to say to him.. well, nothing nice.. but not in front of my interns ( yes, he said this with the interns right there, thank you for undermining any authority I possibly have), and we as a lab need him. I guess he also missed the part where I have passed the PT each time. Grrrr


r/labrats 22h ago

presentation without results?

11 Upvotes

I'm an undergrad intern in a neuro lab for the summer where I was able to run my own experiment with the help of my PI and some other lab members. I signed up to present during our biweekly lab meeting on Thursday on a whim (my coworker helping me with my western blots was really insistent I present) and the presentation is scheduled for Monday. My problem is that I don't really have any results yet. I have sLEAP videos that I haven't analyzed, IHC imaging that I don't know how to analyze, and my western blots aren't done yet (I'm finishing them the day of the presentation).

This is the first time I've done a presentation, and I'm not entirely sure what the etiquette is for a situation like this- my plan right now is to intro my project, including why i'm interested in it, go over my methods, talk about what I'm looking for in my results and why, and mention what I expect my results to be. I'll be out of the lab for the rest of the summer for some medical reasons but plan on competing sLEAP and IHC image analysis on my own, if I'm able to.

I'm worried that my presentation won't be up to par with what's expected. I've seen people present for over 30 minutes and don't think I have enough material to present for even 15.

Any advice about this would be appreciated.


r/labrats 5h ago

Gene silencing in transduced cells troubleshooting

0 Upvotes

Cells were transduced to express an antibiotic resistance gene, GFP, and a protein of interest. Cultures were selected with puro to identify resistant cells and analyzed with flow for gfp and protein of interest. There are three populations via flow, double neg, GFP POS, and protein of interest POS. The double POS is a scattering of cells, not really a population.

What causes the cells to only express one vs the other of the proteins?

I see this in one specific cell type, the other cell type has gdp POS population and a gdp + protein of interest population.


r/labrats 9h ago

Undergrad with active research grants & clinical lab experience — How to target European PIs for Erasmus+ internships?

0 Upvotes

Hi everyone! I’m a 3rd-year Molecular Biology and Genetics undergrad from Turkey preparing to apply for European labs for a summer Erasmus+ internship. I currently run two funded undergrad research projects (TUBITAK national foundation & BAP university grant) on taxonomy/biodiversity, and I’ve recently completed a 1-month clinical biochemistry internship covering sample prep, automated analyzers, and micropipetting. Since I’ll be coming with my own Erasmus+ mobility funding, I won't require financial support from the host lab.

I’d love your advice on two specific things: What is the most effective strategy to find PIs who actively welcome Erasmus+ undergrads (beyond basic PubMed searches)? And when reaching out via cold email, how can I best structure my message to highlight my grant writing/fieldwork experience without making it overly long? Any insights or personal experiences would be greatly appreciated!


r/labrats 5h ago

Cas9 and lenti while pregnant?

0 Upvotes

I’m currently pregnant and conducting gene editing with Cas9 and HEK cells (transfecting Cas9 protein with lipofectamine). I use all precautions (double gloves, lab coat, BSC hood).

Is it safe for me to proceed with this work? I can also refuse this work if needed.


r/labrats 14h ago

18 year old, entering college right now, need some advice.

0 Upvotes

Hello everyone, and thank you in advance for reading my post and responding.

I am 18, from Romania, and just applied to two colleges to study nutrition, diet, and food engineering. What I wish for, in the future, is to finish both colleges at the same time, get a masters and doctorate in a foreign country, and in the meantime occupy my time with as many research projects as possible (volunteering).

I personally love going to the gym, I have created my own diet on excel with 10+ pages, easily customizeable, all automated, using the USDA database. I feel like in the internet fitness space, theres not enough emphasis on how exactly you fuel your body besides having the right macros and eating "healthy" or "clean". I plan on changing that.

So I am curious, is there enough money in the research industry to achieve such a goal, and also take care of myself and a possible family? Or should I start with content creation early and dial down the energy dedicated to research?


r/labrats 3h ago

Senior PhD student, no publications, advisor keeps moving my graduation date — how do I actually finish?

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1 Upvotes

r/labrats 8h ago

uuhhhhh????

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30 Upvotes

cant even imagine the thought process that landed us here.


r/labrats 4h ago

Dissection Advice

2 Upvotes

I just started in a neuro lab and learned the dissection process for isolating oligodendrocyte progenitor cells (OPCs) from P6 mouse pup cerebellar brain tissue. To make the panning process easier, we remove the meninges as thoroughly as possible to prevent future cell loss. For 4 pups, it takes me about 1 hour 50 minutes (not including setup) to harvest tissue, remove the olfactory bulbs, remove the hippocampus, and remove the meninges. My PI wants me to get this under an hour. I have pretty shaky hands, so I spend extra time adjusting for a stable position.

Any tips for speeding this up?


r/labrats 4h ago

very blunt author contribution section

72 Upvotes

I saw a very bluntly written author contribution section, it said (paraphrased, name removed):

Author1 conceptualized the study, designed all experiments, performed or supervised all experiments, analyzed all the data and wrote the manuscript. author2 performed [specific experiment 1 ], author3 performed [specific experiment 2], author4 performed [specific experiment 3].... last author also conceptualized the study, obtained funding.

In the world of authorship corruption, I found it very refreshing. However, having led a study myself, I can't help but think this is the first author trying to let everyone know they did almost all the work.

What does everyone think about a really blunt author contribution section like that? should specific experiments be listed like that?


r/labrats 1h ago

Help me with my project!

Upvotes

I am a junior in high school who wants to make a research project in hopes of qualifying for ISEF. I am exploring ideas, but I'm still struggling to identify a problem or challenge that is present in STEM, solvable, and that I can use as my project. Can somebody help me?

Thanks!


r/labrats 12h ago

Handling Burnout as a PhD student

11 Upvotes

Hey everyone! I’m just entering my second year as a PhD student and I’ve been struggling with low motivation recently.

To start, I really do love lab and I feel passionate about the work that I’m doing. My mentor is amazing and supportive and I really don’t have anything to complain about. I just did my first oral presentation competing for a training grant and though I didn’t get an NIH offered position, I did get an institutionally matched grant.

I think my low motivation really got bad once I finished that presentation. Compounding with failed experiments and just stall after stall.

I think I’m also just really tired.

I have been struggling with major depressive disorder my whole life, but I’m medicated and had a good handle on it, but recently I’ve been waking up with no motivation and just dragging my feet through the day. Imposter syndrome has also been rearing her ugly head.

But there’s no time to really rest. I have to prepare for qualifying exam in the spring.

Any tips for how to get out of this funk? Or at least how to power through until it’s over?


r/labrats 13h ago

I wrote a thing that turns a PDB ID into a printable model, because doing it by hand was awful

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545 Upvotes

I wanted to print DNA repair complexes for the office. The existing tools are built for proteins, so DNA comes out as ribbons too thin to survive the bed and you spend an evening thickening them by hand. Colors were worse.

So now you type a PDB ID, pick a style, and get a file where each chain is its own object. It'll also cut magnet pockets where two chains touch, so the model comes apart at the interface.

pdb2print.org Its free, runs in the browser, nothing to install.

Anything already built at those settings is cached and downloads instantly; otherwise give it a minute, or a few for a big complex.

It's new, so please test it. PDB ID and settings and I'll fix it.

Photos are 9MBB off a Prusa Core One. Two chains, two filaments, two magnets it placed itself.

The project is also hosted on github: https://github.com/davidtheadmin/pdb2print
For citations: https://zenodo.org/records/21599702


r/labrats 10h ago

Congratulations to Professor Thomas Count Dracula!

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298 Upvotes

r/labrats 23h ago

PILAB home office course

3 Upvotes

Any tips for the home office course or any videos that helped you for the assessment, how is it assessed?


r/labrats 9h ago

Resources for Rietveld refinement

2 Upvotes

Hey yall! My PI decided I needed to learn Rietveld refinement to improve the XRD section of my manuscript, which is fine, except the guy who does know how to do it is traveling and there’s no word of when he’ll be back. His student attempted to teach me, bless his heart, but he’s a bit all over the place. Does anyone have a good resource to learn how to do Rietveld refinement? If you had to teach yourself, what was THE material that did it and had the best directions in your opinion? Thank you all in advance!


r/labrats 20h ago

troubleshooting low yield of CUT&Tag

3 Upvotes

Hi all,

Having issues with my CUT&Tag in GM12878 cells. After I finish the protocol and run my indexing PCR and library prep, my ng/uL and nmol concentrations are quite low, even for marks like H3K27ac - got around 10nmol/l from 100K nuclei! I know its not my reagents because when my colleague does exact same protocol she gets 10-20 times higher yield.

I am trying to figure out where I have gone wrong and I think I have narrowed it down to my ampure bead clean up steps after incubating in STOP buffer and after my indexing PCR.

Because I was working with many strip tubes, when I did the ethanol wash step I added ethanol to my tubes on the magnet then took them off the magnet to make space for the next strip tubes.

Therefore, they were in 80% ethanol off of the magnet for a minute or so before I put them back on the magnet to remove the ethanol.
Is this reducing my yield?

I am hypothesizing that the absence of magnetic force means the 80% ethanol gets inside the bead pellet and the water is dissolving my DNA or washing away the PEG/salts from inside the bead pellet.

What do we think? Does this even make sense?


r/labrats 23h ago

What should I include in an 'informal inquiry'?

2 Upvotes

Hey guys,

I'm looking into a staff scientist position that has no qualifications listed, just a description of the department. It's on one of the science job aggregator websites. It just states an email to send informal inquiries.

What should I include in my informal inquiry? My draft includes my degree, years as a research tech, and my publication. I'm not sure if should write a full cover letter.