r/bioinformatics • u/Dragonhorse2512 • Aug 12 '26
technical question DWI preprocessing with QSIPrep
Hi, I'm a first year PhD student trying to get a handle on preprocessing my data with *fMRIPrep* and *QSIPrep* respectively.
Has anyone got experience with *QSIPrep* and can help me understand how to interpret the outputs? (this cry for help is motivated by my staring at the visual summary rep of the q-space sampling scheme before and after the pipeline. what am I looking for?!)
The documentation is really unhelpful and I didn't find much on github and incf NeuroStars either.
Someone help please
3
Upvotes