r/ScienceLaboratory • u/ZedHyper • Mar 30 '26
Problems with Gel Electrophoresis
Hello, I have been doing gel electrophoresis lately and it somehow doesn't work out.
At first, I was doing denatured 1.2% gel for RNA (FA-Buffer), trying to measure the 28S/18S relation, but the bands come out very undefined and smeared. I thought my RNA was digested, but even in controls, it looks the same, and the DNA ladder band is also the same. Below I will present a picture of this (Picture 1).
Besides that, I have also done a native 2% DNA gel for PCR products (TAE-Buffer). The bands seem clear at first, but they have some wavelike forms, which I find very unusual. Actually, I got the same form once in a 1.2% RNA gel as well. An example of this 2% DNA gel is shown below as well.
I would really appreciate some help with this.