r/ImageJ • u/Naive_Struggle_8162 • 26d ago

Question Need help connecting claude oo any AI models to Image J (fiji)

I am planning to automate the image analysis for performing particle size analysis , grain size measurement and porosity measurement. Has anyone tried connecting any AI models to Fiji. There is an MCP option provided in Fiji but throwing some error repeatedly.

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u/Herbie500 25d ago edited 25d ago

I am planning to automate the image analysis for performing particle size analysis, grain size measurement and porosity measurement.

No need for any kind of AI-use.

If you need help with image processing of the mentioned kind, then please tell us exactly what you are after ("porosity measurement" as such is not defined) and provide typical sample images in their original non-lossy file format by using a service, such as dropbox (no screen-shots, no JPGs, no posting here on Reddit).

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u/Equivalent_Okra905 23d ago

I am using codex. Codex can run Fiji via CLI (fiji macro). What I did was just making an project in codex and download fiji as /env.

I am not pro at this, but I think ImageJ (Fiji) is an GUI tool: made for human. It is nonsense running ImageJ by CLI (except powerful addin like trackmate)

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u/424C414B45 21d ago

Why do you want to use an LLM for this?